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| 1 | Silicon-rutile - an ultra-high pressure (UHP) mineral from an ophiolite显示文摘Silicon(Si)-rutile separated from the Luobusa podiform chromitite in the Yarlung Zangbo ophiolite of southern Tibet is typically about 50 μm×50 μm×200 μm in size and consists mainly of SiO2 and TiO2. The average mineral formula is (Ti0.82Si0.18)O2. Powder X-ray diffraction data show that it is tetragonal in form, and the unit cell dimensions and other parameters are: a=4.591(2), c=2.946(2), v=62.09(5)3, c/a=0.6415, with a molar volume about 5% smaller than rutile (JCPDS, 21-1276). The Si4+ ions in silicon rutile are six-coordinated, and are substituted for Ti4+ in the rutile structural sites. The Si-rutile, along with other associated ultra-high minerals discovered in the chromitite, such as octahedral silicate, silicon-magnesium spinel (Si4+ ions are six-coordinated), diamond, and intergrown of SiO2 and FeO phases, probably originated from the transition zone or the lower mantle, and were brought to shallow levels beneath an oceanic spreading ridge by an upwelling superplume. | YANGJingsui BAIWenji FANGQingson YANBinggang SHINicheng MAZhesheng DAIMingquan XIONGMing | 2003 | Progress in Natural Science:Materials International2003，13，7： | 14 |
| 2 | EVALUATION OF THE INTROGRESSED LINES AND SCREENING FOR ELITE GERMPLASM IN GOSSYPIUM显示文摘In this research, 155 cotton introgressed lines from interspecific hybridization have been col- lected for the purpose of evaluating the effects of enhancement of new upland cotton germplasm by interspecific hybridization, screening for elite germ- plasm and improving cotton breeding. Through iden- tification of various agricultural traits, we found that different wild cotton species had different capacities in terms of fiber quality, disease resistance, tolerance of abiotic stress, pest resistance and so on. SSR molecular marker technology has been used to de- tect the exotic genetic elements in interspecific hy- brids, and 25 SSR specific loci that can be classified into two groups were found among 15 pairs of SSR primers. Results also showed that 8 exotic germ- plasm (Gossypium barbadense, G. arboreum and G. thurberi, etc) had genetic transmission toward upland cotton. A strategy of screening elite germplasm with exotic genes based on the molecular marker-assisted breeding techniques was suggested, and 18 lines with high-quality fiber and 4 lines with resistance to Fusanrium wilt and Verticillium wilt have been ob- tained. | PANG Chaoyou DU Xiongming MA Zhiying | 2006 | Chinese Science Bulletin2006，51，3： | 4 |
| 3 | Review of oxidative stress and antioxidative defense mechanisms in Gossypium hirsutum L.in response to extreme abiotic conditions显示文摘Oxidative stress occurs when crop plants are exposed to extreme abiotic conditions that lead to the excessive production and accumulation of reactive oxygen species(ROS).Those extreme abiotic conditions or stresses include drought,high temperature,heavy metals,salinity,and ultraviolet radiation,and they cause yield and quality losses in crops.ROS are highly reactive species found in nature that can attack plant organelles,metabolites,and molecules by interrupting various metabolic pathways until cell death occurs.Plants have evolved defense mechanisms for the production of antioxidants to detoxify the ROS and to protect the plant against oxidative damage.Modern researches in crop plants revealed that low levels of ROS act as a signal which induces tolerance to environmental extremes by altering the expression of defensive genes.In this review,we summarized the processes involved in ROS production in response to several types of abiotic stress in cotton plants.Furthermore,we discussed the achievements in the understanding and improving oxidative stress tolerance in cotton in recent years.Researches related to plant oxidative stresses have shown excellent potential for the development of stress-tolerant crops. | QAMER Zainab CHAUDHARY Muhammad Tanees DU Xiongming HINZE Lori AZHAR Muhammad Tehsee | 2021 | Journal of Cotton Research2021，4，2： | 4 |
| 4 | Expression patterns and functional divergence of homologous genes accompanied by polyploidization in cotton(Gossypium hirsutum L.)显示文摘Naturally allotetraploid cotton has been widely used as an ideal model to investigate gene expression remodeling as a consequence of polyploidization.However,the global gene pattern variation during early fiber development was unknown.In this study,through RNA-seq technology,we comprehensively investigated the expression patterns of homologous genes between allotetraploid cotton(G.hirsutum)and its diploid progenitors(G.arboreum and G.raimondii)at the fiber early development stage.In tetraploid cotton,genes showed expression level dominance(ELD)bias toward the A genome.This phenomenon was explained by the up-/downregulation of the homologs from the nondominant progenitor(D genome).Gene ontology(GO)enrichment results indicated that the ELD-A genes might be a prominent cause responsible for fiber property change through regulating the fatty acid biosynthesis/metabolism and microtubule procession,and the ELD-D genes might be involved in transcription regulation and stress inducement.In addition,the number and proportion of completely A-and D-subfunctionalized gene were similar at different fiber development stages.However,for neofunctionalization,the number and proportion of reactivated D-derived genes were greater than those of A at 3 and 5 DPA.Eventually,we found that some homologous genes belonging to several specific pathways might create novel asymmetric transcripts between two subgenomes during polyploidization and domestication process,further making the fiber property meet the human demands.Our study identified determinate pathways and their involved genes between allotetraploid cotton and their progenitors at early fiber development stages,providing new insights into the mechanism of cotton fiber evolution. | Zhen Peng Hua Cheng Gaofei Sun Zhaoe Pan Xiao Wang Xiaoli Geng Shoupu He Xiongming Du | 2020 | Science China(Life Sciences)2020，63，10： | 2 |
| 5 | POSITIVE SOLUTIONS FOR SINGULAR BOUNDARY VALUE PROBLEM OF SECOND ORDER显示文摘Some results of existence of positive solutions for singular boundary value problems{-u″(t) = p(t)f(u(t)), t ∈ (0, 1),u(0) = u(1) = 0are given, where the function p(t) may be singular at t = 0,1. | LIUJIAQUAN ZENGPING'AN XIONGMING | 2004 | Chinese Annals of Mathematics,Series B2004，25，3： | 2 |
| 6 | Comparative effect of allopolyploidy on transposable element composition and gene expression between Gossypium hirsutum and its two diploid progenitors显示文摘An allopolyploidization event formed allotetraploid Gossypium species from an A-genome diploid species and a D-genome diploid species. To explore the responses of transposable elements(TEs) to allopolyploidy, we assembled parallel TE datasets from G. hirsutum, G. arboreum and G. raimondii and analyzed the TE types and the effects of TEs on orthologous gene expression in the three Gossypium genomes.Gypsy was the most abundant TE type and most TEs were located $500 bp from genes in all three genomes. In G. hirsutum, 35.6% of genes harbored TE insertions, whereas insertions were more frequent in G. arboreum and G. raimondii. G. hirsutum had the highest proportion of uniquely matching 24-nt small interfering RNAs(siRNAs) that targeted TEs. TEs,particularly those targeted by 24-nt siRNAs, were associated with reduced gene expression, but the effect of TEs on orthologous gene expression varied substantially among species. Orthologous gene expression levels in G. hirsutum were intermediate between those of G. arboreum and G. raimondii, which did not experience TE expansion or reduction resulting from allopolyploidization. This study underscores the diversity of TEs co-opted by host genes and provides insights into the roles of TEs in regulating gene expression in Gossypium. | Hua Cheng Gaofei Sun Shoupu He Wenfang Gong Zhen Peng Ruiping Wang Zhongxu Lin Xiongming Du | 2019 | Journal of Integrative Plant Biology2019，61，1： | 2 |
| 7 | QTL mapping of agronomic and economic traits for four F_(2)populations of upland cotton显示文摘Background:Upland cotton(Gossypium hirsutum)accounts for more than 90%of the annual world cotton output because of its high yield potential.However,yield and fiber quality traits often show negative correlations.We constructed four F_(2)populations of upland cotton,using two normal lines(4133B and SGK9708)with high yield potential but moderate fiber quality and two introgression lines(Suyuan04–3 and J02–247)with superior fiber quality,and used them to investigate the genetic basis underlying complex traits such as yield and fiber quality in upland cotton.We also phenotyped eight agronomic and economic traits and mapped quantitative trait loci(QTLs).Results:Extensive phenotype variations and transgressive segregation were found across the segregation populations.We constructed four genetic maps of 585.97 centiMorgan(cM),752.45 cM,752.45 cM,and 1163.66 cM,one for each of the four F_(2)populations.Fifty QTLs were identified across the four populations(7 for plant height,27 for fiber quality and 16 for yield).The same QTLs were identified in different populations,including qBW4 and qBW2,which were linked to a common simple sequence repeat(SSR)marker,NAU1255.A QTL cluster containing eight QTLs for six different traits was characterized on linkage group 9 of the 4133B×Suyuan04–3 population.Conclusions:These findings will provide insights into the genetic basis of simultaneous improvement of yield and fiber quality in upland cotton breeding. | LI Hongge PAN Zhaoe HE Shoupu JIA Yinhua GENG Xiaoli CHEN Baojun WANG Liru PANG Baoyin DU Xiongming | 2021 | Journal of Cotton Research2021，4，1： | 2 |
| 8 | Heritability and correlation analysis of morphological and yield traits in genetically modified cotton显示文摘Background:Cotton is known for fiber extraction and it is grown in tropical and sub-tropical areas of the world due to having hot weather.Cotton crop has a significant role in GDP of Pakistan.Therefore,the two-years research was conducted to estimate heritability and association among various yield contributing parameters of cotton,i.e.,plant height,number of bolls per plant,number of sympodial branches per plant,seed cotton yield,boll weight,seed index,ginning outturn(GOT),fiber length,fiber strength,and fiber fineness.Results:Association analysis revealed that seed cotton yield had a significant positive correlation with plant height,number of bolls per plant,number of sympodial branches per plant,GOT,staple length and fiber strength.Staple length and fiber strength were negatively linked with each other.Estimates of heritability were high for all of the traits except the number of sympodial branches per plant and boll weight.Conclusion:The parent IUB-222 was found to be the best for plant height,the number of bolls per plant,boll weight,GOT,seed cotton yield,and seed index.The genotypes namely,NIAB-414 and VH-367 were identified as the best parents for fiber length,strength,and fineness.Among the crosses NIAB-414×IUB-222 was the best for the number of bolls per plant,seed index,seed cotton yield and fiber fineness,whereas,the cross of NIAB-414×CIM-632 was good for plant height.The combination of A555×CIM-632 was the best for the number of sympodial branches per plant,boll weight,fiber length,and strength,and VH-367×CIM-632 proved the best for GOT. | REHMAN Abdul MUSTAFA Nida DU Xiongming AZHAR Muhammad Tehseen | 2020 | Journal of Cotton Research2020，3，3： | 2 |
| 9 | Petrological implication of wagnerite-Ma5bc in the quartzofeldspathic gneiss, Larsemann Hills, East Antarctica显示文摘Wagnerite-Ma5bc polytype is found in a gneiss associated with cordierite-prismatine-bearing gneiss, northern Stornes Peninsula, Larsemann Hills, East Antarctica. Wagnerite coexists with apatite and both of them are present as rock-forming minerals. Ca depletion is not essential to the formation of wagnerite; sufficient Mg, P and F components, and a relatively low Ca/Mg ratio is critical, otherwise only apatite crystallizes. Strong anatexis of the quartzofeldspathic gneiss of the area results in differentiation and separate enrichment of leuco- and melanocratic components. P and F tend to accumulate in the mafic-rich melanocratic component, and when their abundance reaches certain concentration, wagnerite forms. It is perhaps the chemistry of the setting that controls the appearance of wagnerite, whereas the PT condition is responsible for the variety of wagnerite polytype. A disordered polytype crystallizes at relatively high temperature, then cools down slowly and transforms into one of the ordered polytypes, in this case, the Ma5bc polytype. | RENLiudong EdwardS.GREW XIONGMing WANGYanbin | 2005 | Progress in Natural Science:Materials International2005，15，6： | 1 |
| 10 | Identification and expression analysis of Tubulin gene family in upland cotton显示文摘Background:Cott on fibers are single-celled exte nsions of the seed epidermis,a model tissue for studying cytoskeleton.Tubulin genes play a critical role in synthesizing the microtubules(MT)as a core element of the cytoskeleton.However,there is a lack of studies concerning the systematic characterization of the tubulin gene family in cotton.Therefore,the identification and portrayal of G.hirsutum tubulin genes can provide key targets for molecular manipulation in cotton breeding.Result:In this study,we investigated all tubulin genes from different plant species and identified 98 tubulin genes in G.hirsutum.Phylogenetic an a lysis showed that tubulin family genes were classified into three subfamilies.The protein motifs and gene structure ofβ-tubulin genes are more conserved compared withγ-tubulin genes.Most tubulin genes are located at the proximate ends of the chromosomes.Spatiotemporal expression pattern by transcriptome and qRT-PCR analysis revealed that 12α-tubulin andβ-tubulin genes are specifically expressed during different fiber development stages.However,Gh.A03G027200,Gh.D03G 169300,and Gh.A1lG258900 had differential expression patterns at distinct stages of fiber development in varieties JO2508 and ZRI015.Conclusion:In this study,the evol ut io nary an alysis showed that the tubulin genes were divided into three clades.The genetic structures and molecular functions were highly con served in different plants.Three candidate genes,Gh.A03G027200f Gh.D03G169300,and Gh.A11G258900 may play a key role during fiber development complementing fiber length and strength. | CHEN Baojun ZHAO Junjie FU Guoyong PEI Xinxin PAN Zhao'e LI Hongge AHMED Haris HE Shoupu DU Xiongming | 2021 | Journal of Cotton Research2021，4，3： | 1 |
| 11 | An X-Ray Diffraction Study of an Inclusion in Diamond from the Luobusha Chromite Deposit in Tibet,China显示文摘Diamond was found in podiform chromitites of ophiolite and harzburgite from Luobusha, Tibet. There are silicate inclusions in some diamond grains from this area. In the present work, the CCD (charge coupled detector) technology of X-ray powder diffraction was applied to the study of the inclusion in diamond from the ophiolite of Tibet. Diffraction patterns are obtained even though the inclusion is only 20 μm in crystal size. The results show that the inclusion in diamond consists of talc and clinochrysotile. Therefore, it is clear that the diamond from the ophiolite of Luobusha, Tibet, is natural diamond rather than a synthetic one. | SHINicheng BAIWenji MAZhesheng FANGQingsong XIONGMing YANBinggang DAIMingquan YANGJingsui | 2003 | Acta Geologica Sinica(English Edition)2003，77，3： | 1 |
| 12 | Crystal Structure of Natural Non-metamict Ti- and Fe^(2+)-rich Chevkinite-(Ce)显示文摘The crystal structure of non-metamict Ti- and Fe2+-rich chevkinite-(Ce) has been redetermined with the single -crystal sample collected from Bayan Obo, Inner Mongolia, China. The chemical formula of the sample is Ce4Fe2Ti3Si4O22. The crystals are monoclinic with the unit cell parameters a = 13.4656(15) ?, b = 5.7356(6) ?, c = 11.0977(12) ?, β= 100.636(2)o, V = 842.39 (16) ?3 and Z = 2. The structures of Ti- and Fe2+-rich chevkinite-(Ce) were refined with space groups P21/a and C2/m. Least-squares refinement results show that both structural models of Ti- and Fe2+-rich chevkinite-(Ce) are very good, R[F2>2σ(F2)] =0.027 with P21/a and R[F2>2σ(F2)] =0.021 with C2/m. In order to illustrate the relationship between the two space groups P21/a and C2/m, the distribution of diffraction intensities was inspected. Pseudo extinction was found, i.e., reflections with h+k=2n are systematically strong, while those with h+k=2n+1 are weak. By neglecting the systematically weak (h+k=2n+1) reflections the space group becomes C2/m. There is a mirror plane in the C2/m perpendicular to the b axis. However, oxygen atoms in the P21/a model are of a symmetrical relationship with the corresponding pseudo mirror plane. It is concluded that the crystal structure of non-metamict Ti- and Fe2+-rich chevkinite-(Ce) is a superstructure with the space group of P21/a, which is of pseudo symmetry corresponding to the space group C2/m. | LIGuowu YANGGuangming MAZhengsheng SHINicheng XIONGMing FANHaifu SHENGGanfu | 2005 | Acta Geologica Sinica(English Edition)2005，79，3： | 1 |
| 13 | NotoginsenosideR1attenuatesath-eroscleroticlesionsinApoEdeficientmousemodel显示文摘 | JiaC XiongM WangP etal | 2014 | PLoSOne2014，9，99： | 1 |
| 14 | Preparations of Pure Alkaline Earth Molybdate Phases from Single Molecular Precursors显示文摘The pure phases of alkaline earth molybdates MMoO 4, where M=Mg, Ca, Sr or Ba, were synthesized via the calcination of the related citrato oxomolybdate complexes. The mixed metal oxides can be highly dispersed at the atomic level due to the existence of uniform citrato oxomolybdenum precursors in definite composition. The complexing effect helps to produce the fine-grained oxides with particle size in the ultrafine scale(<100 nm) at heat-treatment temperatures below 500 ℃. The structures of the precursor complexes and the finally heat-treated particles were studied by means of IR, XRD, DSC, DTA and TG techniques. The morphologies of the particles were observed by using the SEM technique. The average particle sizes were calculated to be in the range of 3050 nm based on X-ray diffraction line-broadening and SEM images, indicating the poor conglomeration of crystallite at low temperatures. | JIANGYa-qi ZHAOHong FANGZhi-min WANHui-lin XIONGMing ZHOUZhao-hui | 2004 | Chemical Research in Chinese Universities2004，20，6： | 1 |
| 15 | Genome-wide identification and expression profiling of photosystem II(PsbX)gene family in upland cotton(Gossypium hirsutum L.)显示文摘Background Photosystem II(PSII)constitutes an intricate assembly of protein pigments,featuring extrinsic and intrinsic polypeptides within the photosynthetic membrane.The low-molecular-weight transmembrane protein PsbX has been identified in PSII,which is associated with the oxygen-evolving complex.The expression of PsbX gene protein is regulated by light.PsbX’s central role involves the regulation of PSII,facilitating the binding of quinone molecules to the Qb(PsbA)site,and it additionally plays a crucial role in optimizing the efficiency of photosynthesis.Despite these insights,a comprehensive understanding of the PsbX gene’s functions has remained elusive.Results In this study,we identified ten PsbX genes in Gossypium hirsutum L.The phylogenetic analysis results showed that 40 genes from nine species were classified into one clade.The resulting sequence logos exhibited substantial conservation across the N and C terminals at multiple sites among all Gossypium species.Furthermore,the ortholo-gous/paralogous,Ka/Ks ratio revealed that cotton PsbX genes subjected to positive as well as purifying selection pressure might lead to limited divergence,which resulted in the whole genome and segmental duplication.The expression patterns of GhPsbX genes exhibited variations across specific tissues,as indicated by the analysis.Moreover,the expression of GhPsbX genes could potentially be regulated in response to salt,intense light,and drought stresses.Therefore,GhPsbX genes may play a significant role in the modulation of photosynthesis under adverse abiotic conditions.Conclusion We examined the structure and function of PsbX gene family very first by using comparative genom-ics and systems biology approaches in cotton.It seems that PsbX gene family plays a vital role during the growth and development of cotton under stress conditions.Collectively,the results of this study provide basic information to unveil the molecular and physiological function of PsbX genes of cotton plants. | RAZA Irum PARVEEN Abida AHMAD Adeel HU Daowu PAN Zhaoe ALI Imran DU Xiongming | 2024 | Journal of Cotton Research2024，7，1： | 0 |
| 16 | Genetics of biochemical attributes regulating morpho-physiology of upland cotton under high temperature conditions显示文摘Background Cotton is a strategically important fibre crop for global textile industry.It profoundly impacts several countries’industrial and agricultural sectors.Sustainable cotton production is continuously threatened by the unpre-dictable changes in climate,specifically high temperatures.Breeding heat-tolerant,high-yielding cotton cultivars with wide adaptability to be grown in the regions with rising temperatures is one of the primary objectives of modern cotton breeding programmes.Therefore,the main objective of the current study is to figure out the effective breed-ing approach to imparting heat tolerance as well as the judicious utilization of commercially significant and stress-tolerant attributes in cotton breeding.Initially,the two most notable heat-susceptible(FH-115 and NIAB Kiran)and tolerant(IUB-13 and GH-Mubarak)cotton cultivars were spotted to develop filial and backcross populations to accom-plish the preceding study objectives.The heat tolerant cultivars were screened on the basis of various morphological(seed cotton yield per plant,ginning turnout percentage),physiological(pollen viability,cell membrane thermostabil-ity)and biochemical(peroxidase activity,proline content,hydrogen peroxide content)parameters.Results The results clearly exhibited that heat stress consequently had a detrimental impact on every studied plant trait,as revealed by the ability of crossing and their backcross populations to tolerate high temperatures.However,when considering overall yield,biochemical,and physiological traits,the IUB-13×FH-115 cross went over particularly well at both normal and high temperature conditions.Moreover,overall seed cotton yield per plant exhibited a posi-tive correlation with both pollen viability and antioxidant levels(POD activity and proline content).Conclusions Selection from segregation population and criteria involving pollen viability and antioxidant levels concluded to be an effective strategy for the screening of heat-tolerant cotton germplasms.Therefore,understanding acquired from this study can assist breeders identifying traits that should be prioritized in order to develop climate resilient cotton cultivars. | MAJEED Sajid CHAUDHARY Muhammad Tanees MUBARIK Muhammad Salman RANA Iqrar Ahmad SHABAN Muhammad TAN Daniel KY JIA Yinhua DU Xiongming HINZE Lori AZHAR Muhammad Tehseen | 2024 | Journal of Cotton Research2024，7，1： | 0 |
| 17 | GhWDL3 is involved in the formation and development of fiber cell morphology in upland cotton(Gossypium hirsutum L.)显示文摘Background Cotton fiber is a model tissue for studying microtubule-associated proteins(MAPs).The Xklp2(TPX2)proteins that belong to the novel MAPs member mainly participate in the formation and development of microtubule(MT).However,there is a lack of studies concerning the systematic characterization of the TPX2 genes family in cotton.Therefore,the identification and portrayal of G.hirsutum TPX2 genes can provide key targets for molecular manipula-tion in the breeding of cotton fiber improvement.Result In this study,TPX2 family genes were classified into two distinct subclasses TPXLs and MAP genes WAVE DAMP-ENED2-LIKE(WDLs)and quite conservative in quantity.GhWDL3 was significantly up-regulated in 15 days post anthe-sis fibers of ZRI-015(an upland cotton with longer and stronger fiber).GhWDL3 promotes all stem hairs to become straight when overexpressed in Arabidopsis,which may indirectly regulate cotton fiber cell morphology during fiber development.Virus induced gene silencing(VIGS)results showed that GhWDL3 inhibited fiber cell elongation at fiber development periods through regulating the expression of cell wall related genes.Conclusion These results reveal that GhWDL3 regulated cotton fiber cell elongation and provide crucial information for the further investigation in the regulatory mechanisms/networks of cotton fiber length. | CHEN Baojun TIAN Zailong FU Guoyong ZHANG Ai SUN Yaru WANG Jingjing PAN Zhaoe LI Hongge HU Daowu XIA Yingying HE Shoupu DU Xiongming | 2024 | Journal of Cotton Research2024，7，1： | 0 |
| 18 | Genomic insight into the divergence and adaptive potential of a forgotten landrace G.hirsutum L.purpurascens显示文摘Wild progenitors are an excellent source for strengthening the genetic basis and accumulation of desirable variation lost because of directional selection and adaptation in modern cultivars.Here,we re-evaluate a landrace of Gossypium hirsutum,formerly known as Gossypium purpurascens.Our study seeks to understand the genomic structure,variation,and breeding potential of this landrace,providing potential insights into the biogeographic history and genomic changes likely associated with domestication.A core set of accessions,including current varieties,obsolete accessions,G.purpurascens,and other geographical landraces,are subjected to genotyping along with multilocation phenotyping.Population fixation statistics suggests a marked differentiation between G.purpurascens and three other groups,emphasizing the divergent genomic behavior of G.purpurascens.Phylogenetic analysis establishes the primitive nature of G.purpurascens,identifying it as a vital source of functional variation,the inclusion of which in the upland cotton(cultivated G.hirsutum)gene pool may broaden the genetic basis of modern cultivars.Genome-wide association results indicate multiple loci associated with domestication regions corresponding to flowering and fiber quality.Moreover,the conserved nature of G.purpurascens can also provide insights into the evolutionary process of G.hirsutum. | Mian Faisal Nazir Shoupu He Haris Ahmed Zareen Sarfraz Yinhua Jia Hongge Li Gaofei Sun Muhammad Shahid Iqbal Zhaoe Pan Xiongming Du | 2021 | Journal of Genetics and Genomics2021，48，6： | 0 |
| 19 | A genome-wide association study of lateral root number for Asian cotton(Gossypium arboreum L.)显示文摘Background:The lateral root is one of the most important organs that constitute the root architecture system in plants.It can directly affect the contact area between plants and soil and plays an important role in plant structural support and nutrient absorption.Optimizing root architecture systems can greatly increase crop yields.This study was designed to identify the molecular markers and candidate genes associated with lateral root development in cotton and to evaluate correlations with yield and disease traits.Result:The number of lateral roots for 14-day old seedlings was recorded for 215 Gossypium arboreum accessions.A correlation analysis showed that the number of lateral roots positively correlates with the sympodial branch node and seed index traits,but negatively correlates with lint percentage.A Genome-wide association study(GWAS)identified 18 significant SNPs with 19 candidate genes associated with the lateral root number.Expression analysis identified three genes(FLA 12,WRKY29,and RBOHA)associated with lateral root development.Conclusion:GWAS an alysis identified key SNPs and candidate gen esfor lateral root number,a nd gen es of FLA 12,WRKY29,and RBOHA may play a pivotal role in lateral root development in Asian cotton. | HU Daowu HE Shoupu SUN Gaofei JIA Yinhua GENG Xiaoli WANG Liru PAN Zhaoe CHEN Baojun LI Hongge ZUBAIR Iqbal WANG Xiaoyang ZHAO Zibo GE Yuting PANG Baoyin DU Xiongming | 2022 | Journal of Cotton Research2022，5，2： | 0 |
| 20 | Genomic divergence in cotton germplasm related to maturity and heterosis显示文摘Commercial varieties of upland cotton(Gossypium hirsutum)have undergone extensive breeding for agronomic traits,such as fiber quality,disease resistance,and yield.Cotton breeding programs have widely used Chinese upland cotton source germplasm(CUCSG)with excellent agronomic traits.A better understanding of the genetic diversity and genomic characteristics of these accessions could accelerate the identification of desirable alleles.Here,we analyzed 10,522 high-quality singlenucleotide polymorphisms(SNP)with the CottonSNP63 K microarray in 137 cotton accessions(including 12 hybrids of upland cotton).These data were used to investigate the genetic diversity,population structure,and genomic characteristics of each population and the contribution of these loci to heterosis.Three subgroups were identified,in agreement with their knownpedigrees,geographical distributions,and times since introduction.For each group,we identified lineagespecific genomic divergence regions,which potentially harbor key alleles that determine the characteristics of each group,such as early maturity-related loci.Investigation of the distribution of heterozygous loci,among 12 commercial cotton hybrids,revealed a potential role for these regions in heterosis.Our study provides insight into the population structure of upland cotton germplasm.Furthermore,the overlap between lineagespecific regions and heterozygous loci,in the high-yield hybrids,suggests a role for these regions in cotton heterosis. | Shoupu He Gaofei Sun Longyu Huang Daigang Yang Panhong Dai Dayun Zhou Yuzhen Wu Xiongfeng Ma Xiongming Du Shoujun Wei Jun Peng Meng Kuang | 2019 | Journal of Integrative Plant Biology2019，61，8： | 0 |
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