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| 1 | Genome-wide Analysis of Plant-specific Dof Transcription Factor Family in Tomato显示文摘The Dof (DNA binding with One Finger) family encoding single zinc finger proteins has been known as a family of plant-specific transcription factors. These transcription factors are involved in a variety of functions of importance for different biological processes in plants. In the current study, we identified 34 Dof family genes in tomato (Solanum lycopersicum L.), distributed on 11 chromosomes. A complete overview of SlDof genes in tomato is presented, including the gene structures, chromosome locations, phylogeny, protein motifs and evolution pattern. Phylogenetic analysis of 34 SlDof proteins resulted in four classes constituting six clusters. In addition, a comparative analysis between these genes in tomato, Arabidopsis (Arabidopsis thaliana L.) and rice (Oryza sativa L.) was also performed. The tomato Dof family expansion has been dated to recent duplication events, and segmental duplication is predominant for the SlDof genes. Furthermore, the SlDof genes displayed differential expression either in their transcript abundance or in their expression patterns under normal growth conditions. This is the first step towards genome-wide analyses of the Dof genes in tomato. Our study provides a very useful reference for cloning and functional analysis of the members of this gene family in tomato and other species. | Xiaofeng Cai Yuyang Zhang Chanjuan Zhang Tingyan Zhang Tixu Hu Jie Ye Junhong Zhang Taotao Wang Hanxia Li Zhibiao Ye | 2013 | Journal of Integrative Plant Biology2013，55，6： | 26 |
| 2 | Bioaccumulation of Heavy Metal in Wild Growing Mushrooms from Liangshan Yi Nationality Autonomous Prefecture,China显示文摘The heavy metal bioaccumulation levels of 13 species of mushrooms were studied. 13 different species of wild mush-rooms growing in China were analyzed for Cu, Zn, Pb, Cd, and As. Contents of Cu, Zn, Cd and Pb in mushroom and Cu, Zn in soil were tested by atomic absorption spectrometer (AAS), and As in samples by atomic fluorescent light (AFL). Contents of Cd and Pb in soil were analyzed by graphite furnace AAS. The results showed that contents of Cu, Pb, Cd, and As in Termitomyces microcarpus were the highest in the tested mushroom samples, which were 135.00, 13.28, 65.30, and 1.60 mg·kg-1 (dry biomass) respectively, and the corresponding bioconcentration factor (BCF) for Cu and Cd was 57 and 1 674 separately, which was the highest data in 13 mushroom species. The capability of Boletus griseus for Cd accumulation was very strong with BCF of 300. when people consume the wild edible mushrooms, contents of Cd and Pb should be greatly considered. | ZHANG Dan GAO Tingyan MA Pei LUO Ying SU Pengcheng | 2008 | Wuhan University Journal of Natural Sciences2008，13，3： | 9 |
| 3 | Biosorption of Cu(Ⅱ) and Pb(Ⅱ) by Auricularia polytricha显示文摘For searching biological material for heavy metal removal of waste-water,using macrofungus Auricularia polytricha as biosorbent for Cu2+ and Pb2+ removal was investigated. After shaking and biosorbing Cu2+ and Pb2+ in solution by biosorbents,the filtrates were tested by AAS and the adsorbed quantity of Cu2+ and Pb2+ was calculated . The biosorbents were effective in removal of Cu2+ and Pb2+ on the biosorbents that showed a high-est value around pH 5-6. The biosorption rate of Cu2+ and Pb2+ on A. polytri-cha biomass decreased with increasing the initial concentration of Cu2+ and Pb2+ in the medium. The biosorption of Cu2+ and Pb2+ on the biomasses fol-lows pseudo-second order kinetics. The determined maximum biosorption capacities presented by the fungus biomass were 3.34 and 13.03 mg·g-1 dry weight for Cu2+ and Pb2+,respectively by the biosorption equilibrium with Langmuir adsorption isotherm. According to the whole data analysis in each experiment of studying Cu2+ and Pb2+ biosorption including condition factors and adsorption isotherm,the adsorbed capacity of Pb2+ by A. polytricha bio-mass was bigger than Cu2+. The biosorption by A. polytricha was most effec-tive when pH 5-6. The biosorbents are suitable for low Cu2+ and Pb2+ con-centration waste-water,especially for Pb2+ removal. | ZHANG Dan GAO Jianwei GAO Tingyan YING Yigao CHEN Hong | 2007 | Wuhan University Journal of Natural Sciences2007，12，4： | 4 |
| 4 | Carbon-nanoparticle-assisted growth of high quality bilayer WS2 by atmospheric pressure chemical vapor deposition显示文摘Two-dimensional(2D)WS2 offers great prospects for assembling next-generation optoelectronic and electronic devices due to its thickness-dependent optical and electronic properties.However,layer-number-controlled growth of WS2 is still a challenge up to now.This work presents controlled growth of bilayer WS2 triangular flakes by carbon-nanoparticle-assisted chemical vapor deposition(CVD)process.The growth mechanism is also proposed.In addition,the field effect transistors(FETs)based on monolayer and bilayer WS2 are also fabricated and investigated.The bilayer FET displays a mobility of 34 cm2·V^-1·s^-1,much higher than that of the monolayer FET.The high figures of merit make bilayer WS2 a promising candidate in high-performance electronics and optoelectronics. | Jieyuan Liang Lijie Zhang Xiaoxiao Li Baojun Pan Tingyan Luo Dayan Liu Chao Zou Nannan Liu Yue Hu Keqin Yang Shaoming Huang | 2019 | Nano Research2019，12，11： | 2 |
| 5 | Landscape dynamic network biomarker analysis reveals the tipping point of transcriptome reprogramming to prevent skin photodamage显示文摘Skin,as the outmost layer of human body,is frequently exposed to environmental stressors including pollutants and ultraviolet(UV),which could lead to skin disorders.Generally,skin response process to ultraviolet B(UVB)irradiation is a nonlinear dynamic process,with unknown underlying molecular mechanism of critical transition.Here,the landscape dynamic network biomarker(lDNB)analysis of time series transcriptome data on 3D skin model was conducted to reveal the complicated process of skin response to UV irradiation at both molecular and network levels.The advanced l-DNB analysis approach showed that:(i)there was a tipping point before critical transition state during pigmentation process,validated by 3D skin model;(ii)13 core DNB genes were identified to detect the tipping point as a network biomarker,supported by computational assessment;(iii)core DNB genes such as COL7A1 and CTNNB1 can effectively predict skin lightening,validated by independent human skin data.Overall,this study provides new insights for skin response to repetitive UVB irradiation,including dynamic pathway pattern,biphasic response,and DNBs for skin lightening change,and enables us to further understand the skin resilience process after external stress. | Chengming Zhang Hong Zhang Jing Ge Tingyan Mi Xiao Cui Fengjuan Tu Xuelan Gu Tao Zeng Luonan Chen | 2021 | Journal of Molecular Cell Biology2021，13，11： | 1 |
| 6 | Preparation and characterization of a strong basic anion exchanger by radiation-induced grafting of styrene onto poly(tetrafluoroethylene) fiber显示文摘 | Qikun Zhang Sujuan Zhang Shuixia Chen Peiyuan Li Tingyan Qin Siguo Yuan | 2008 | Journal of Colloid And Interface Science2008，，2： | 1 |
| 7 | Combined antitumor activity of cucurbitacin B and docetaxel in laryngeal cancer显示文摘 | Tingyan Liu Meixia Zhang Hongliang Zhang Chunyan Sun Xiaolin Yang Yihui Deng Wenyue Ji | 2008 | European Journal of Pharmacology2008，，1： | 1 |
| 8 | Correction to‘Landscape dynamic network biomarker analysis reveals the tipping point of transcriptome reprogramming to prevent skin photodamage’显示文摘In the originally published version of this article(p.822),there was an error in the second affiliation of author Chengming Zhang.The erroneous affiliation was given as‘University of the Chinese Academy of Sciences’.This has now been corrected to‘University of Chinese Academy of Sciences’. | Chengming Zhang Hong Zhang Jing Ge Tingyan Mi Xiao Cui Fengjuan Tu Xuelan Gu Tao Zeng Luonan Chen | 2022 | Journal of Molecular Cell Biology2022，14，3： | 0 |
| 9 | A novel fault-tolerant scheduling approach for collaborative workflows in an edge-IoT environment显示文摘As a newly emerging computing paradigm, edge computing shows great capability in supporting and boosting 5G and Internet-of-Things (IoT) oriented applications, e.g., scientific workflows with low-latency, elastic, and on-demand provisioning of computational resources. However, the geographically distributed IoT resources are usually interconnected with each other through unreliable communications and ever-changing contexts, which brings in strong heterogeneity, potential vulnerability, and instability of computing infrastructures at different levels. It thus remains a challenge to enforce high fault-tolerance of edge-IoT scientific computing task flows, especially when the supporting computing infrastructures are deployed in a collaborative, distributed, and dynamic environment that is prone to faults and failures. This work proposes a novel fault-tolerant scheduling approach for edge-IoT collaborative workflows. The proposed approach first conducts a dependency-based task allocation analysis, then leverages a Primary-Backup (PB) strategy for tolerating task failures that occur at edge nodes, and finally designs a deep Q-learning algorithm for identifying the near-optimal workflow task scheduling scheme. We conduct extensive simulative case studies on multiple randomly-generated workflow and real-world edge-IoT server position datasets. Results clearly suggest that our proposed method outperforms the state-of-the-art competitors in terms of task completion ratio, server active time, and resource utilization. | Tingyan Long Yong Ma Lei Wu Yunni Xia Ning Jiang Jianqi Li Xiaodong Fu Xiangmi You Bo Zhang | 2022 | Digital Communications and Networks2022，8，6： | 0 |
| 10 | Cyclin gene SlCycB1 alters plant architecture in association with histone H3.2 in tomato显示文摘Cell cycle regulation plays a critical role in plant growth and development.In this study,the role of a tomato cell cycle gene SlCycB1 has been characterized.Expression analysis revealed that SlCycB1 was mostly expressed in stem,root,and leaves,with relative lower expression in flower and fruit.Tomato plants overexpressing SlCycB1 exhibited a reduction in cell number and increased cell size leading to the growth retardation.Furthermore,yeast two-hybrid analysis and bimolecular fluorescence complementation revealed that SlCycB1 interacted with histone H3.2,an essential component of the nucleosome.Histone H3.2 was transcriptionally up-regulated in the SlCycB1 overexpressing tomato lines.Furthermore,the overexpression of histone H3.2 in transgenic plants showed similar phenotypes to SlCycB1 overexpressing lines.Based on these findings,we concluded that SlCycB1 overexpression altered tomato architecture in association with histone H3.2. | Tingyan Zhang Yaru Wang Shoaib Munir Taotao Wang Zhibiao Ye Junhong Zhang Yuyang Zhang | 2022 | Horticultural Plant Journal2022，8，3： | 0 |
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