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| 1 | An integrated approach for increasing breeding efficiency in apple and peach in Europe显示文摘Despite the availability of whole genome sequences of apple and peach,there has been a considerable gap between genomics and breeding.To bridge the gap,the European Union funded the FruitBreedomics project(March 2011 to August 2015)involving 28 research institutes and private companies.Three complementary approaches were pursued:(i)tool and software development,(ii)deciphering genetic control of main horticultural traits taking into account allelic diversity and(iii)developing plant materials,tools and methodologies for breeders.Decisive breakthroughs were made including the making available of ready-to-go DNA diagnostic tests for Marker Assisted Breeding,development of new,dense SNP arrays in apple and peach,new phenotypic methods for some complex traits,software for gene/QTL discovery on breeding germplasm via Pedigree Based Analysis(PBA).This resulted in the discovery of highly predictive molecular markers for traits of horticultural interest via PBA and via Genome Wide Association Studies(GWAS)on several European genebank collections.FruitBreedomics also developed pre-breeding plant materials in which multiple sources of resistance were pyramided and software that can support breeders in their selection activities.Through FruitBreedomics,significant progresses were made in the field of apple and peach breeding,genetics,genomics and bioinformatics of which advantage will be made by breeders,germplasm curators and scientists.A major part of the data collected during the project has been stored in the FruitBreedomics database and has been made available to the public.This review covers the scientific discoveries made in this major endeavour,and perspective in the apple and peach breeding and genomics in Europe and beyond. | Francois Laurens Maria JoséAranzana Pere Arus Daniele Bassi Marco Bink Joan Bonany Andrea Caprera Luca Corelli-Grappadelli Evelyne Costes Charles-Eric Durel Jehan-Baptiste Mauroux Hélène Muranty Nelson Nazzicari Thierry Pascal Andrea Patocchi Andreas Peil Bénédicte Quilot-Turion Laura Rossini Alessandra Stella Michela Troggio Riccardo Velasco Eric van de Weg | 2018 | Horticulture Research2018，5，1： | 10 |
| 2 | A high-density, multi-parental SNP genetic map on apple validates a new mapping approach for outcrossing species显示文摘Quantitative trait loci(QTL)mapping approaches rely on the correct ordering of molecular markers along the chromosomes,which can be obtained from genetic linkage maps or a reference genome sequence.For apple(Malus domestica Borkh),the genome sequence v1 and v2 could not meet this need;therefore,a novel approach was devised to develop a dense genetic linkage map,providing the most reliable marker-loci order for the highest possible number of markers.The approach was based on four strategies:(i)the use of multiple full-sib families,(ii)the reduction of missing information through the use of HaploBlocks and alternative calling procedures for single-nucleotide polymorphism(SNP)markers,(iii)the construction of a single backcross-type data set including all families,and(iv)a two-step map generation procedure based on the sequential inclusion of markers.The map comprises 15417 SNP markers,clustered in 3 K HaploBlock markers spanning 1267 cM,with an average distance between adjacent markers of 0.37 cM and a maximum distance of 3.29 cM.Moreover,chromosome 5 was oriented according to its homoeologous chromosome 10.This map was useful to improve the apple genome sequence,design the Axiom Apple 480 K SNP array and perform multifamily-based QTL studies.Its collinearity with the genome sequences v1 and v3 are reported.To our knowledge,this is the shortest published SNP map in apple,while including the largest number of markers,families and individuals.This result validates our methodology,proving its value for the construction of integrated linkage maps for any outbreeding species. | Erica A Di Pierro Luca Gianfranceschi Mario Di Guardo Herma JJ Koehorst-van Putten Johannes W Kruisselbrink Sara Longhi Michela Troggio Luca Bianco Hélène Muranty Giulia Pagliarani Stefano Tartarini Thomas Letschka Lidia Lozano Luis Larisa Garkava-Gustavsson Diego Micheletti Marco CAM Bink Roeland E Voorrips Ebrahimi Aziz Riccardo Velasco François Laurens W Eric van de Weg | 2016 | Horticulture Research2016，3，1： | 3 |
| 3 | The contingent value of marketing strategy innovativeness for product development performance in Chinese new technology ventures显示文摘 | Atuahene-Gima K Li H Y de Luca L M | | 0，，03： | 1 |
| 4 | A Dynamic Model for Plant Growth: A Simulation of Dry Matter Accumulation for Tobacco显示文摘 | WANN M PAPER C D LUCAS H L | 1978 | Photosynthetica1978，，12： | 1 |
| 5 | Experimental Relations between Physical Structure and Mechanical Properties of a Huge Number of Drawn Poly (EthyleneTerephthalate) Yarns 显示文摘 | Heuvel H M Lucas L J | 1992 | Journal of Applied Polymer Science1992，，45： | 1 |
| 6 | Can Met Quart显示文摘 | Lucas L D Olette M | 1984 | 23: 1791984，23，： | 1 |
| 7 | The draft genome of watermelon (Citrullus lanatus ) and reseqnencing of 20 diverse accessions显示文摘 | Guo S G Zhang J G Sun H H Salse J Lucas W J Zhang H Y Zheng Y Mao L Y Ren Y WangZ W Min J M Guo X S Murat F Ham B K Zhang Z L Gao S Huang M Xu Y M Zhong S L Bombarely A Mueller L Zhao H He H Q Zhang Y Zhang Z H Huang S W Tan T Pang E Lin K Hu Q Kuang H H Ni P X Wang B Liu J G Kou Q H Hou W J Zou X H Jiang J Gong G Y Klee K Schoof H Huang Y Hu X S Dong S S Liang D Q Wang J Wu K Xia Y Zhao X Zheng Z Q Xing M Liang X M Huang B Q Lv T Wang J Y Yin Y Yi H P Li R Q Wu M Z Levi A Zhang X P Giovannoni J Wang J Li YF Fei Z J Xu Y | 2013 | Nature genetics2013，45，1： | 1 |
| 8 | Blueberry prevents bone loss in ovariectomized rat model of postmenopausal osteoporosis显示文摘 | Devareddy L Hooshmand S Collins J K Lucas E A Chai S C Arjmandi B H | 2008 | The Journal of nutritional biochemistry2008，19，10： | 1 |
| 9 | Subjective Well Being: Three Decades of Progress 显示文摘 | Diener E Suh E M Lucas R E Smith H L | 1999 | Psychological Bulletin1999，125，2： | 1 |
| 10 | A new glass of infrared transmitting glass-ceramics based on controlled nucleation and growth of alkali hadlide in a sulfide based glass matrix 显示文摘 | Zhang X H Ma H L Lucas J | 2004 | J Non-Cryst Solids2004，337，： | 1 |
| 11 | Characterization and pathogenicity of Pythium species isolated from turfgrass with symptoms of root and crown rot in North Cqrolina显示文摘 | Abad Z G Shew H D Lucas L T | 1994 | Phytopathology1994，84，： | 1 |
| 12 | Characterization and pathogenicity of Pythium species isolated from turfgrass with symptoms of root and crown rot in North Carolina显示文摘 | Abad Z G Shew H D Lucas L T | 1994 | Phytopathology1994，84，： | 1 |
| 13 | Subjective Well-Being:Three Decades of Progress显示文摘 | DIENER E SUH E M LUCAS R E SMITH H L | | 0，，2： | 1 |
| 14 | The genome of the cucumber显示文摘 | HUANG S LI R ZHANG Z LI L GU X FAN W LUCAS W J WANG X XIE B NI P REN Y ZHU H LI J LIN K JIN W FEI Z LI G STAUB J KILIAN A VAN DER VOSSEN EA WUY GUO J HE J JIA Z REN Y TIAN G LU Y RUAN J QIANW WANG M HUANG Q LI B XUAN Z CAO J ASAN WUZ ZHANG J CAI Q BAI Y ZHAO B HAN Y LI Y LI X WANG S SHI Q LIU S CHO WK KIM JY XU Y HELLER-USZYNSKA K MIAO H CHENG Z ZHANG S WU J YANG Y KANG H LI M LIANG H REN X SHI Z WEN M JIAN M YANG H ZHANG G YANG Z CHEN R LIU S LI J MA L LIU H ZHOU Y ZHAO J FANG X LI G FANG L LI Y LIUD ZHENG H ZHANG Y QIN N LI Z YANG G YANG S BOLUND L KRISTIANSEN K ZHENG H LI S ZHANG X YANG H WANG J SUN R ZHANG B JIANG S WANG J DUY LI S | 2009 | Cucumis Sativus L NatureGenetics2009，41，： | 1 |
| 15 | Morphological sta- bility ofcopper-silver multilayer thin films at elevated tempera- tures显示文摘 | KNOEDLER H L LUCAS G E LEVI C G | 2003 | Metallurgical and Materials Transactions A2003，34，5： | 1 |
| 16 | a Dynamic model for plant growth: a simulation of dry matter accumulation for tobacco 显示文摘 | Wann M Paper C D Lucas H L | 1978 | Photosynthetica1978，12，： | 1 |
| 17 | Limited effectiveness of antiviral treatment for hepatitis C in an urban HIV clinic显示文摘 | Shruti H Mehta Gregory M Lucas Lisa B Mirel Michael Torbenson Yvonne Higgins Richard D Moore David L Thomas Mark S Sulkowski | 2006 | AIDS2006，，18： | 1 |
| 18 | The genome of the cucumber,Cucumis sativus L显示文摘 | Huang S W Li R Q Zhang Z H Li L Gu X F Fan W Lucas W J Wang X W Xie B Y Ni P X Ren Y Zhu H M Li J Lin K Jin W W Fei Z J Li G C Staub J B Kilian A van der Vossen E A G Wu Y Guo J He J Jia Z Q Ren Y Tian G Lu Y Ruan J Qian W Wang M W Huang Q F Li B Xuan Z L | | 0，，12： | 1 |
| 19 | Effect of dispersed crude oil exposure upon the aerobic metabolic scope in juvenile golden grey mullet ( Liza aurata )显示文摘 | Thomas Milinkovitch Julie Lucas Stéphane Le Floch Hélène Thomas-Guyon Christel Lefran?ois | 2012 | Marine Pollution Bulletin2012，，4： | 1 |
| 20 | Characterzation and pathogenicity of Pythium species isolated from turfgrass with symptoms of root and crown rot in North Cqrolina 显示文摘 | Abad Z G Shew H D Lucas L T | 1994 | Phytopathology1994，84，： | 1 |
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